Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
CHD1O14646 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.95
CHD1O14646 AC026396.1-201ENST00000419388 421 ntBASIC33.45■■■□□ 2.95
CHD1O14646 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.45■■■□□ 2.95
CHD1O14646 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC33.45■■■□□ 2.95
CHD1O14646 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
CHD1O14646 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC33.45■■■□□ 2.95
CHD1O14646 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
CHD1O14646 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC33.45■■■□□ 2.95
CHD1O14646 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
CHD1O14646 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC33.45■■■□□ 2.94
CHD1O14646 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC33.45■■■□□ 2.94
CHD1O14646 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC33.45■■■□□ 2.94
CHD1O14646 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC33.44■■■□□ 2.94
CHD1O14646 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC33.44■■■□□ 2.94
CHD1O14646 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
CHD1O14646 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC33.44■■■□□ 2.94
CHD1O14646 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC33.44■■■□□ 2.94
CHD1O14646 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHD1O14646 FAM8A6P-201ENST00000407496 1135 ntBASIC33.43■■■□□ 2.94
CHD1O14646 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC33.43■■■□□ 2.94
CHD1O14646 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC33.43■■■□□ 2.94
CHD1O14646 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
CHD1O14646 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
CHD1O14646 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC33.43■■■□□ 2.94
CHD1O14646 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHD1O14646 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC33.42■■■□□ 2.94
CHD1O14646 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 STX5-203ENST00000394690 1568 ntTSL 5 BASIC33.42■■■□□ 2.94
CHD1O14646 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 AC117947.1-201ENST00000427448 529 ntBASIC33.42■■■□□ 2.94
CHD1O14646 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC33.42■■■□□ 2.94
CHD1O14646 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC33.42■■■□□ 2.94
CHD1O14646 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHD1O14646 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC33.42■■■□□ 2.94
CHD1O14646 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC33.42■■■□□ 2.94
CHD1O14646 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC33.42■■■□□ 2.94
CHD1O14646 AC092053.2-201ENST00000640557 1818 ntBASIC33.41■■■□□ 2.94
CHD1O14646 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CHD1O14646 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC33.41■■■□□ 2.94
CHD1O14646 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CHD1O14646 LINC01238-205ENST00000567549 1107 ntBASIC33.41■■■□□ 2.94
CHD1O14646 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC33.4■■■□□ 2.94
CHD1O14646 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC33.4■■■□□ 2.94
CHD1O14646 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CHD1O14646 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC33.4■■■□□ 2.94
CHD1O14646 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC33.39■■■□□ 2.94
CHD1O14646 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC33.39■■■□□ 2.94
CHD1O14646 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC33.39■■■□□ 2.94
CHD1O14646 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC33.39■■■□□ 2.94
CHD1O14646 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC33.39■■■□□ 2.94
CHD1O14646 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC33.39■■■□□ 2.94
CHD1O14646 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CHD1O14646 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC33.39■■■□□ 2.94
CHD1O14646 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC33.39■■■□□ 2.94
CHD1O14646 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CHD1O14646 PRR31-201ENST00000371629 978 ntTSL 2 BASIC33.39■■■□□ 2.94
CHD1O14646 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC33.39■■■□□ 2.94
CHD1O14646 KSR1P1-201ENST00000446298 240 ntBASIC33.39■■■□□ 2.94
CHD1O14646 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC33.39■■■□□ 2.94
CHD1O14646 VPS72-207ENST00000640458 689 ntTSL 5 BASIC33.39■■■□□ 2.94
CHD1O14646 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CHD1O14646 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.93
CHD1O14646 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD1O14646 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD1O14646 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
CHD1O14646 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC33.38■■■□□ 2.93
CHD1O14646 ATP5G1P1-201ENST00000448724 379 ntBASIC33.38■■■□□ 2.93
CHD1O14646 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC33.38■■■□□ 2.93
CHD1O14646 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD1O14646 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD1O14646 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC33.38■■■□□ 2.93
CHD1O14646 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHD1O14646 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC33.37■■■□□ 2.93
CHD1O14646 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC33.37■■■□□ 2.93
CHD1O14646 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC33.37■■■□□ 2.93
CHD1O14646 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC33.37■■■□□ 2.93
CHD1O14646 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC33.37■■■□□ 2.93
CHD1O14646 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CHD1O14646 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
CHD1O14646 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC33.36■■■□□ 2.93
CHD1O14646 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 COPE-203ENST00000351079 907 ntTSL 2 BASIC33.36■■■□□ 2.93
CHD1O14646 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
CHD1O14646 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC33.36■■■□□ 2.93
CHD1O14646 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC33.36■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms