Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CUX2O14529 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC35.25■■■■□ 3.23
CUX2O14529 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CUX2O14529 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC35.25■■■■□ 3.23
CUX2O14529 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
CUX2O14529 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC35.25■■■■□ 3.23
CUX2O14529 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
CUX2O14529 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC35.24■■■■□ 3.23
CUX2O14529 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC35.24■■■■□ 3.23
CUX2O14529 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC35.23■■■■□ 3.23
CUX2O14529 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CUX2O14529 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CUX2O14529 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CUX2O14529 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC35.23■■■■□ 3.23
CUX2O14529 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CUX2O14529 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CUX2O14529 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC35.23■■■■□ 3.23
CUX2O14529 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC35.23■■■■□ 3.23
CUX2O14529 FAM207BP-201ENST00000447172 505 ntBASIC35.22■■■■□ 3.23
CUX2O14529 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC35.22■■■■□ 3.23
CUX2O14529 CALM1-205ENST00000553542 877 ntTSL 5 BASIC35.22■■■■□ 3.23
CUX2O14529 IRF5-214ENST00000613821 595 ntTSL 5 BASIC35.22■■■■□ 3.23
CUX2O14529 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC35.22■■■■□ 3.23
CUX2O14529 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CUX2O14529 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CUX2O14529 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC35.22■■■■□ 3.23
CUX2O14529 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC35.22■■■■□ 3.23
CUX2O14529 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CUX2O14529 BET1L-202ENST00000332865 533 ntTSL 5 BASIC35.22■■■■□ 3.23
CUX2O14529 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CUX2O14529 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC35.22■■■■□ 3.23
CUX2O14529 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC35.22■■■■□ 3.23
CUX2O14529 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC35.22■■■■□ 3.23
CUX2O14529 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC35.22■■■■□ 3.23
CUX2O14529 KLK8-205ENST00000593490 267 ntTSL 3 BASIC35.22■■■■□ 3.23
CUX2O14529 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC35.22■■■■□ 3.23
CUX2O14529 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC35.21■■■■□ 3.23
CUX2O14529 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CUX2O14529 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
CUX2O14529 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC35.21■■■■□ 3.23
CUX2O14529 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
CUX2O14529 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC35.21■■■■□ 3.23
CUX2O14529 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC35.21■■■■□ 3.23
CUX2O14529 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC35.2■■■■□ 3.23
CUX2O14529 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CUX2O14529 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
CUX2O14529 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
CUX2O14529 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC35.2■■■■□ 3.23
CUX2O14529 C2orf69P3-201ENST00000565542 1120 ntBASIC35.2■■■■□ 3.23
CUX2O14529 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CUX2O14529 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC35.2■■■■□ 3.23
CUX2O14529 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC35.2■■■■□ 3.23
CUX2O14529 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.22
CUX2O14529 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
CUX2O14529 CD320-202ENST00000537716 1119 ntTSL 2 BASIC35.19■■■■□ 3.22
CUX2O14529 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CUX2O14529 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CUX2O14529 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC35.19■■■■□ 3.22
CUX2O14529 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC35.19■■■■□ 3.22
CUX2O14529 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
CUX2O14529 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC35.18■■■■□ 3.22
CUX2O14529 AL121829.2-201ENST00000620908 328 ntBASIC35.18■■■■□ 3.22
CUX2O14529 AC012313.10-201ENST00000623509 926 ntBASIC35.18■■■■□ 3.22
CUX2O14529 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CUX2O14529 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC35.17■■■■□ 3.22
CUX2O14529 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC35.17■■■■□ 3.22
CUX2O14529 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC35.17■■■■□ 3.22
CUX2O14529 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CUX2O14529 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
CUX2O14529 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CUX2O14529 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC35.16■■■■□ 3.22
CUX2O14529 ECEL1P2-202ENST00000465689 757 ntBASIC35.16■■■■□ 3.22
CUX2O14529 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC35.16■■■■□ 3.22
CUX2O14529 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CUX2O14529 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC35.16■■■■□ 3.22
CUX2O14529 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC35.16■■■■□ 3.22
CUX2O14529 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC35.16■■■■□ 3.22
CUX2O14529 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC35.16■■■■□ 3.22
CUX2O14529 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CUX2O14529 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
CUX2O14529 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC35.16■■■■□ 3.22
CUX2O14529 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC35.16■■■■□ 3.22
CUX2O14529 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC35.16■■■■□ 3.22
CUX2O14529 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC35.16■■■■□ 3.22
CUX2O14529 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC35.16■■■■□ 3.22
CUX2O14529 TSPY14P-201ENST00000303979 915 ntBASIC35.16■■■■□ 3.22
CUX2O14529 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC35.16■■■■□ 3.22
CUX2O14529 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC35.16■■■■□ 3.22
CUX2O14529 MOK-233ENST00000524214 1539 ntTSL 2 BASIC35.15■■■■□ 3.22
CUX2O14529 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC35.15■■■■□ 3.22
CUX2O14529 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC35.15■■■■□ 3.22
CUX2O14529 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC35.15■■■■□ 3.22
CUX2O14529 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC35.15■■■■□ 3.22
CUX2O14529 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms