Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.45■□□□□ 0.7
CACNA1AO00555 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.45■□□□□ 0.7
CACNA1AO00555 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.45■□□□□ 0.7
CACNA1AO00555 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CACNA1AO00555 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CACNA1AO00555 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.44■□□□□ 0.7
CACNA1AO00555 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.44■□□□□ 0.7
CACNA1AO00555 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.44■□□□□ 0.7
CACNA1AO00555 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.44■□□□□ 0.7
CACNA1AO00555 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.44■□□□□ 0.7
CACNA1AO00555 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CACNA1AO00555 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.44■□□□□ 0.7
CACNA1AO00555 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.43■□□□□ 0.7
CACNA1AO00555 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.43■□□□□ 0.7
CACNA1AO00555 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1AO00555 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CACNA1AO00555 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.43■□□□□ 0.7
CACNA1AO00555 AP003733.4-201ENST00000623785 1697 ntBASIC19.43■□□□□ 0.7
CACNA1AO00555 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.43■□□□□ 0.7
CACNA1AO00555 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.43■□□□□ 0.7
CACNA1AO00555 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CACNA1AO00555 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1AO00555 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1AO00555 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 HLA-J-202ENST00000469281 1241 ntBASIC19.42■□□□□ 0.7
CACNA1AO00555 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA1AO00555 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA1AO00555 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
CACNA1AO00555 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1AO00555 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1AO00555 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CACNA1AO00555 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CACNA1AO00555 KRT18P13-201ENST00000400056 1290 ntBASIC19.42■□□□□ 0.7
CACNA1AO00555 AL845331.1-201ENST00000424978 1190 ntBASIC19.42■□□□□ 0.7
CACNA1AO00555 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.42■□□□□ 0.7
CACNA1AO00555 AC117500.6-201ENST00000624871 588 ntBASIC19.42■□□□□ 0.7
CACNA1AO00555 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1AO00555 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1AO00555 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1AO00555 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 AC124283.5-201ENST00000624661 1809 ntBASIC19.41■□□□□ 0.7
CACNA1AO00555 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1AO00555 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
CACNA1AO00555 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1AO00555 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1AO00555 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1AO00555 DGCR10-201ENST00000609839 495 ntBASIC19.41■□□□□ 0.7
CACNA1AO00555 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1AO00555 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1AO00555 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1AO00555 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CACNA1AO00555 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1AO00555 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CACNA1AO00555 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1AO00555 AL359075.1-203ENST00000462729 1002 ntBASIC19.4■□□□□ 0.7
CACNA1AO00555 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.4■□□□□ 0.7
CACNA1AO00555 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1AO00555 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1AO00555 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1AO00555 COX11P1-201ENST00000489116 835 ntBASIC19.4■□□□□ 0.7
CACNA1AO00555 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1AO00555 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1AO00555 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1AO00555 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.4■□□□□ 0.7
CACNA1AO00555 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1AO00555 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA1AO00555 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1AO00555 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1AO00555 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1AO00555 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1AO00555 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms