Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC1O00299 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC1O00299 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC1O00299 SMG8-203ENST00000578922 2178 ntBASIC19.19■□□□□ 0.66
CLIC1O00299 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.19■□□□□ 0.66
CLIC1O00299 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLIC1O00299 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC1O00299 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC1O00299 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC1O00299 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLIC1O00299 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.18■□□□□ 0.66
CLIC1O00299 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CLIC1O00299 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.18■□□□□ 0.66
CLIC1O00299 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLIC1O00299 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.18■□□□□ 0.66
CLIC1O00299 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.17■□□□□ 0.66
CLIC1O00299 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLIC1O00299 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLIC1O00299 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLIC1O00299 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.17■□□□□ 0.66
CLIC1O00299 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CLIC1O00299 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.16■□□□□ 0.66
CLIC1O00299 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC1O00299 KRT18P20-201ENST00000548986 1279 ntBASIC19.16■□□□□ 0.66
CLIC1O00299 CCDC92B-201ENST00000575506 885 ntBASIC19.16■□□□□ 0.66
CLIC1O00299 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CLIC1O00299 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC1O00299 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.16■□□□□ 0.66
CLIC1O00299 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLIC1O00299 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC1O00299 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC1O00299 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CLIC1O00299 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CLIC1O00299 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.15■□□□□ 0.66
CLIC1O00299 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.15■□□□□ 0.66
CLIC1O00299 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLIC1O00299 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLIC1O00299 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.15■□□□□ 0.66
CLIC1O00299 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.15■□□□□ 0.66
CLIC1O00299 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CLIC1O00299 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.15■□□□□ 0.66
CLIC1O00299 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLIC1O00299 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.14■□□□□ 0.66
CLIC1O00299 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLIC1O00299 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLIC1O00299 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLIC1O00299 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLIC1O00299 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CLIC1O00299 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC1O00299 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLIC1O00299 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.14■□□□□ 0.65
CLIC1O00299 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CLIC1O00299 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.14■□□□□ 0.65
CLIC1O00299 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.14■□□□□ 0.65
CLIC1O00299 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms