Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
NPIPA2E9PIF3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 AC005229.4-201ENST00000610085 2198 ntBASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 AC006058.3-201ENST00000606217 1069 ntBASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
NPIPA2E9PIF3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 AL137060.1-201ENST00000618151 2648 ntBASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPIPA2E9PIF3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 AIRN-201ENST00000601203 4374 ntBASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 UNC93B5-201ENST00000530315 699 ntBASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPIPA2E9PIF3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPIPA2E9PIF3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPIPA2E9PIF3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.52■□□□□ 0.55
NPIPA2E9PIF3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPIPA2E9PIF3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPIPA2E9PIF3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPIPA2E9PIF3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 AC128676.1-201ENST00000454392 318 ntBASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 AC026366.1-201ENST00000488803 879 ntBASIC18.5■□□□□ 0.55
NPIPA2E9PIF3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms