Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.81□□□□□ -0.04
NACAE9PAV3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.81□□□□□ -0.04
NACAE9PAV3 CDCA4P2-201ENST00000441182 718 ntBASIC14.81□□□□□ -0.04
NACAE9PAV3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NACAE9PAV3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.81□□□□□ -0.04
NACAE9PAV3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NACAE9PAV3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NACAE9PAV3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.8□□□□□ -0.04
NACAE9PAV3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NACAE9PAV3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.8□□□□□ -0.04
NACAE9PAV3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 KRT16P2-201ENST00000414673 1423 ntBASIC14.8□□□□□ -0.04
NACAE9PAV3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 GABARAPL3-202ENST00000624044 1851 ntBASIC14.8□□□□□ -0.04
NACAE9PAV3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC14.8□□□□□ -0.04
NACAE9PAV3 LINC02228-203ENST00000641970 1355 ntBASIC14.8□□□□□ -0.04
NACAE9PAV3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.8□□□□□ -0.04
NACAE9PAV3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.8□□□□□ -0.04
NACAE9PAV3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NACAE9PAV3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NACAE9PAV3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NACAE9PAV3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
NACAE9PAV3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NACAE9PAV3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.79□□□□□ -0.04
NACAE9PAV3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.79□□□□□ -0.04
NACAE9PAV3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.79□□□□□ -0.04
NACAE9PAV3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NACAE9PAV3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NACAE9PAV3 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.79□□□□□ -0.04
NACAE9PAV3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.79□□□□□ -0.04
NACAE9PAV3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.78□□□□□ -0.04
NACAE9PAV3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
NACAE9PAV3 MFSD11-216ENST00000590393 1141 ntBASIC14.78□□□□□ -0.04
NACAE9PAV3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NACAE9PAV3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
NACAE9PAV3 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 POU5F1P4-201ENST00000413175 1085 ntBASIC14.78□□□□□ -0.04
NACAE9PAV3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.78□□□□□ -0.04
NACAE9PAV3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NACAE9PAV3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.78□□□□□ -0.04
NACAE9PAV3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms