Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPSF4LA6NMK7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CPSF4LA6NMK7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.77■□□□□ 0.59
CPSF4LA6NMK7 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 AC099778.1-201ENST00000568593 1911 ntBASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CPSF4LA6NMK7 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
CPSF4LA6NMK7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 ZNRF2P3-201ENST00000424200 374 ntBASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 KRT18P20-201ENST00000548986 1279 ntBASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 MIR2861-201ENST00000636310 90 ntBASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF4LA6NMK7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF4LA6NMK7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CPSF4LA6NMK7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms