Protein–RNA interactions for Protein: A6NHL2

TUBAL3, Tubulin alpha chain-like 3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBAL3A6NHL2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 AP006294.2-201ENST00000641667 209 ntBASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TUBAL3A6NHL2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.23■□□□□ 0.51
TUBAL3A6NHL2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 CDV3P1-201ENST00000471403 739 ntBASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.22■□□□□ 0.51
TUBAL3A6NHL2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 AC245052.3-201ENST00000450182 901 ntBASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TUBAL3A6NHL2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 AC010542.4-201ENST00000563151 1910 ntBASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TUBAL3A6NHL2 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms