Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 AC020916.1-201ENST00000587762 1774 ntBASIC14.41□□□□□ -0.1
LINC01546A6NGU7 AL049812.1-201ENST00000432563 2267 ntBASIC14.41□□□□□ -0.1
LINC01546A6NGU7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LINC01546A6NGU7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 TSPY13P-201ENST00000338964 914 ntBASIC14.4□□□□□ -0.1
LINC01546A6NGU7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 AC010997.5-201ENST00000609182 354 ntBASIC14.4□□□□□ -0.1
LINC01546A6NGU7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LINC01546A6NGU7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 SMUG1P1-201ENST00000590640 811 ntBASIC14.39□□□□□ -0.11
LINC01546A6NGU7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LINC01546A6NGU7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LINC01546A6NGU7 AP004607.4-201ENST00000530158 1459 ntBASIC14.38□□□□□ -0.11
LINC01546A6NGU7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 CROCCP3-202ENST00000420820 1947 ntBASIC14.37□□□□□ -0.11
LINC01546A6NGU7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms