Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 MCRIP2P1-201ENST00000394346 511 ntBASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 LSM12P1-201ENST00000411836 588 ntBASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 DUSP5P2-201ENST00000426873 1033 ntBASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 AC097658.1-201ENST00000475555 843 ntBASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 AC083880.1-201ENST00000608266 535 ntBASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.61□□□□□ -0.23
LRCOL1A6NCL2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 KRT17P1-201ENST00000399211 1546 ntBASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LRCOL1A6NCL2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 TSPY20P-201ENST00000450910 630 ntBASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 OR2A1-AS1-201ENST00000462305 773 ntBASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC13.59□□□□□ -0.23
LRCOL1A6NCL2 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRCOL1A6NCL2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRCOL1A6NCL2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LRCOL1A6NCL2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LRCOL1A6NCL2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC13.58□□□□□ -0.23
LRCOL1A6NCL2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LRCOL1A6NCL2 KRT18P68-201ENST00000392293 1000 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms