Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC144AA2RUR9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CCDC144AA2RUR9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
CCDC144AA2RUR9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 MME-217ENST00000616757 1315 ntTSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CCDC144AA2RUR9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
CCDC144AA2RUR9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC29.45■■■□□ 2.31
CCDC144AA2RUR9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CCDC144AA2RUR9 AC006557.6-201ENST00000623071 864 ntBASIC29.45■■■□□ 2.31
CCDC144AA2RUR9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CCDC144AA2RUR9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
CCDC144AA2RUR9 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 RPS2P4-201ENST00000476944 856 ntBASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 MTDHP1-201ENST00000605323 784 ntBASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC29.45■■■□□ 2.3
CCDC144AA2RUR9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
CCDC144AA2RUR9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 AL596275.1-201ENST00000423464 877 ntBASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 AC120498.8-201ENST00000614275 531 ntBASIC29.43■■■□□ 2.3
CCDC144AA2RUR9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
CCDC144AA2RUR9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 AC121338.2-201ENST00000622535 1744 ntBASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
CCDC144AA2RUR9 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 AL390719.1-204ENST00000412397 1219 ntBASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
CCDC144AA2RUR9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC29.39■■■□□ 2.3
CCDC144AA2RUR9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms