Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 AC233992.3-201ENST00000607491 485 ntBASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
DUXBA0A1W2PPF3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 H19-201ENST00000411754 1788 ntTSL 5 BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 GUSBP5-201ENST00000418136 578 ntBASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 AC126544.1-201ENST00000580842 1059 ntBASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 AC008175.2-201ENST00000612840 297 ntBASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
DUXBA0A1W2PPF3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
DUXBA0A1W2PPF3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 AC105233.4-201ENST00000642045 216 ntBASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 AC138932.1-201ENST00000534164 6830 ntBASIC16.58■□□□□ 0.24
DUXBA0A1W2PPF3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 AC245052.3-201ENST00000450182 901 ntBASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 AC098818.2-201ENST00000564925 2320 ntBASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.57■□□□□ 0.24
DUXBA0A1W2PPF3 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 AL158211.5-201ENST00000623583 2518 ntBASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 MIR4466-201ENST00000606121 54 ntBASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
DUXBA0A1W2PPF3 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms