Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.38□□□□□ -0.11
TRBV6-4A0A1B0GX49 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC007322.4-201ENST00000509611 723 ntBASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 KRT8P36-201ENST00000489121 1440 ntBASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 AL162377.1-201ENST00000618844 1793 ntBASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRBV6-4A0A1B0GX49 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRBV6-4A0A1B0GX49 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC016769.1-201ENST00000409132 1010 ntBASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 KRT18P5-201ENST00000436075 1291 ntBASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRBV6-4A0A1B0GX49 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms