Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC092720.2-201ENST00000602388 1665 ntBASIC23.7■■□□□ 1.38
CCDC196A0A1B0GTZ2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC196A0A1B0GTZ2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 GABARAPL3-202ENST00000624044 1851 ntBASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 PPP1R14BP3-201ENST00000509033 445 ntBASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 AL121832.2-201ENST00000610979 668 ntBASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC23.69■■□□□ 1.38
CCDC196A0A1B0GTZ2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC073314.1-201ENST00000568729 2216 ntBASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC020907.5-201ENST00000624372 1936 ntBASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.68■■□□□ 1.38
CCDC196A0A1B0GTZ2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 AL589743.5-201ENST00000616611 1050 ntBASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC105020.6-201ENST00000621523 1217 ntBASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 MKRN4P-201ENST00000444706 1521 ntBASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.67■■□□□ 1.38
CCDC196A0A1B0GTZ2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 NCF1B-203ENST00000435988 1254 ntBASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC083906.2-201ENST00000511578 360 ntBASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CCDC196A0A1B0GTZ2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC23.65■■□□□ 1.38
CCDC196A0A1B0GTZ2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms