Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TRAV8-4A0A0B4J246 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 AC120498.9-201ENST00000339021 3867 ntBASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-4A0A0B4J246 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-4A0A0B4J246 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.14
TRAV8-4A0A0B4J246 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 PKD1P1-201ENST00000458669 6805 ntBASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 FEM1AP4-201ENST00000443167 1987 ntBASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 NARF-205ENST00000412079 1760 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 AC005837.3-201ENST00000612163 286 ntBASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-4A0A0B4J246 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms