Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-7A0A0A0MS04 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 RARRES2P11-201ENST00000635158 484 ntBASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 KRT16P2-201ENST00000414673 1423 ntBASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-7A0A0A0MS04 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 AC138907.5-202ENST00000569484 235 ntBASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV6-7A0A0A0MS04 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV6-7A0A0A0MS04 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRBV6-7A0A0A0MS04 AP000974.1-201ENST00000623909 2387 ntBASIC17.02■□□□□ 0.31
TRBV6-7A0A0A0MS04 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC092720.2-201ENST00000602388 1665 ntBASIC17.01■□□□□ 0.31
TRBV6-7A0A0A0MS04 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 NME4-202ENST00000382940 766 ntTSL 3 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC245052.3-201ENST00000450182 901 ntBASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms