Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV20-1A0A075B6N2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AL139384.1-201ENST00000612143 3047 ntBASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AC012313.1-201ENST00000593393 3059 ntBASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AC025884.2-201ENST00000553429 711 ntBASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AL390961.4-201ENST00000623958 2535 ntBASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV20-1A0A075B6N2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 CHML-204ENST00000638121 920 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRBV20-1A0A075B6N2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 RPS2P35-201ENST00000443417 897 ntBASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 DUX4L28-201ENST00000623687 678 ntBASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 AC125437.2-201ENST00000625180 2167 ntBASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV20-1A0A075B6N2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV20-1A0A075B6N2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV20-1A0A075B6N2 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV20-1A0A075B6N2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms