Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 HP-207ENST00000562526 685 ntTSL 3 BASIC9.38□□□□□ -0.91
UBE4BO95155 AC010650.1-201ENST00000567559 494 ntBASIC9.38□□□□□ -0.91
UBE4BO95155 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE4BO95155 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
UBE4BO95155 AC091953.4-201ENST00000625179 341 ntBASIC9.38□□□□□ -0.91
UBE4BO95155 ANKMY2-205ENST00000627859 210 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE4BO95155 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
UBE4BO95155 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE4BO95155 SUN1-219ENST00000452783 3717 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE4BO95155 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC9.38□□□□□ -0.91
UBE4BO95155 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 AC011453.1-201ENST00000597619 2239 ntBASIC9.38□□□□□ -0.91
UBE4BO95155 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 LINC01140-201ENST00000461990 3181 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 LINC01877-203ENST00000439734 2287 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 ERG-210ENST00000442448 5034 ntTSL 5 BASIC9.38□□□□□ -0.91
UBE4BO95155 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC9.38□□□□□ -0.91
UBE4BO95155 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
UBE4BO95155 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC9.37□□□□□ -0.91
UBE4BO95155 PPP3CA-205ENST00000507176 1958 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 Z97200.1-201ENST00000606154 2045 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 AC009044.1-201ENST00000624577 1798 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 CDY4P-201ENST00000418290 1513 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 MIR425-201ENST00000362162 87 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 WRBP1-201ENST00000423352 334 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 ARL17B-201ENST00000434041 798 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 FABP5P10-201ENST00000435729 408 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 AC104772.1-201ENST00000444764 862 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 ARL17A-203ENST00000445552 798 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 LMNTD1-203ENST00000445693 1285 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 RN7SL757P-201ENST00000466709 301 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 AC104164.4-201ENST00000483456 493 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 RPS3P7-201ENST00000488662 726 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 MTND6P17-201ENST00000511811 519 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 AC020688.1-201ENST00000519282 1248 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 AC018653.2-201ENST00000540190 238 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 ILF2P2-201ENST00000547482 1117 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 COX5AP2-201ENST00000554418 394 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 AC010536.2-201ENST00000563036 338 ntTSL 3 BASIC9.37□□□□□ -0.91
UBE4BO95155 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 ZNF283-205ENST00000590950 466 ntTSL 5 BASIC9.37□□□□□ -0.91
UBE4BO95155 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC9.37□□□□□ -0.91
UBE4BO95155 AC233702.11-201ENST00000598588 333 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC9.37□□□□□ -0.91
UBE4BO95155 AC002059.1-201ENST00000608014 477 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 GNAS-AS1_5.1-201ENST00000614281 121 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
UBE4BO95155 LINC01002-219ENST00000632747 621 ntTSL 5 BASIC9.37□□□□□ -0.91
UBE4BO95155 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
UBE4BO95155 THBS3-201ENST00000368378 3145 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 CPEB4-209ENST00000522336 1551 ntTSL 5 BASIC9.37□□□□□ -0.91
UBE4BO95155 PAPD4-202ENST00000423041 3223 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 LINC02291-201ENST00000355909 1670 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 PARP9-201ENST00000360356 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC9.37□□□□□ -0.91
UBE4BO95155 CASP8-205ENST00000358485 2930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 TRIM60P19-201ENST00000452879 1462 ntBASIC9.37□□□□□ -0.91
UBE4BO95155 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
UBE4BO95155 RSU1-203ENST00000377921 3919 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 TP63-211ENST00000449992 1506 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 NPSR1-202ENST00000360581 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC9.36□□□□□ -0.91
UBE4BO95155 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
UBE4BO95155 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 FTH1P3-201ENST00000394290 584 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC9.36□□□□□ -0.91
UBE4BO95155 SEC22A-210ENST00000492595 972 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 VKORC1-208ENST00000498155 870 ntTSL 5 BASIC9.36□□□□□ -0.91
UBE4BO95155 LINC01331-201ENST00000507781 568 ntTSL 4 BASIC9.36□□□□□ -0.91
UBE4BO95155 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC9.36□□□□□ -0.91
UBE4BO95155 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC9.36□□□□□ -0.91
UBE4BO95155 AL352979.1-201ENST00000554238 297 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 AC022884.1-201ENST00000578490 577 ntTSL 4 BASIC9.36□□□□□ -0.91
UBE4BO95155 AC125421.2-201ENST00000580370 583 ntTSL 4 BASIC9.36□□□□□ -0.91
UBE4BO95155 AC125421.2-202ENST00000580776 477 ntTSL 3 BASIC9.36□□□□□ -0.91
UBE4BO95155 RN7SL804P-201ENST00000582466 298 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 AC060766.2-201ENST00000588235 334 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC9.36□□□□□ -0.91
UBE4BO95155 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 AC112219.2-201ENST00000608390 532 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms