Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
LMO3Q8TAP4 TRIO-214ENST00000509967 4949 ntTSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 MARF1-202ENST00000540441 7105 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 ERVV-2-201ENST00000601417 2431 ntAPPRIS P1 TSL 4 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 ST5-237ENST00000530991 3396 ntTSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 C1orf27-203ENST00000419367 1900 ntTSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 OR10G7-201ENST00000330487 936 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 RN7SKP72-201ENST00000362327 292 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 PSMD10-205ENST00000372295 779 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 BPIFA1-202ENST00000375413 1026 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 HCG21-204ENST00000419481 605 ntTSL 3 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 KDM4A-AS1-203ENST00000434346 833 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 PSPC1P1-201ENST00000442352 665 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 LDHAP3-201ENST00000448312 1008 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 PROX1-AS1-203ENST00000451396 476 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AF186996.1-201ENST00000466578 1015 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 RN7SL448P-201ENST00000475566 295 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 ALG1L12P-201ENST00000515046 434 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 IGKV3-34-201ENST00000521692 293 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 RPL10P9-201ENST00000522551 645 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AL157931.1-201ENST00000575845 585 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AC067796.1-201ENST00000586795 496 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AL358335.3-201ENST00000604678 327 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AC019322.2-201ENST00000605634 147 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 CARMN-212ENST00000614896 536 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 RBBP4P3-201ENST00000619705 1283 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 HSPD1P5-201ENST00000511127 1720 ntBASIC9.1□□□□□ -0.95
LMO3Q8TAP4 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 SEPT6-203ENST00000354416 4652 ntAPPRIS ALT1 TSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 ERG-204ENST00000398907 4809 ntTSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 ZNF286B-201ENST00000285274 5145 ntTSL 3 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 IGSF1-205ENST00000370904 5413 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 MYH8-201ENST00000403437 6041 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
LMO3Q8TAP4 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 CDH23-203ENST00000398788 4329 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 MIR425-201ENST00000362162 87 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 RN7SKP133-201ENST00000364845 340 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 LYPLA2P3-201ENST00000417429 576 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AC091132.2-201ENST00000433601 769 ntTSL 3 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AC012501.2-201ENST00000437634 1281 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 IFNWP5-201ENST00000445100 588 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 RN7SL745P-201ENST00000484900 299 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 IGHVII-15-1-201ENST00000517931 220 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AC087639.1-201ENST00000560974 920 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 RN7SL804P-201ENST00000582466 298 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 ZNF415-223ENST00000601215 561 ntTSL 4 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AC083862.2-201ENST00000608819 1145 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AC093458.1-201ENST00000608912 222 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 MIR7848-201ENST00000617402 101 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AC079602.4-201ENST00000637836 532 ntBASIC9.09□□□□□ -0.95
LMO3Q8TAP4 IFT46-201ENST00000264020 1819 ntTSL 2 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 PINK1-AS-201ENST00000451424 4443 ntTSL 2 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 FRMD7-201ENST00000298542 3198 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 AP003025.2-202ENST00000414466 4335 ntTSL 2 BASIC9.09□□□□□ -0.95
LMO3Q8TAP4 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC9.09□□□□□ -0.96
LMO3Q8TAP4 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.96
LMO3Q8TAP4 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LMO3Q8TAP4 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC9.08□□□□□ -0.96
LMO3Q8TAP4 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LMO3Q8TAP4 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms