Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 RDH11-201ENST00000381346 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 MINDY3-201ENST00000277632 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 ZNF780A-202ENST00000414720 2396 ntTSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AL138847.1-201ENST00000258651 546 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AHCYP5-201ENST00000331585 1238 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 OR8B4-201ENST00000356130 990 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 TMEM199-202ENST00000395404 971 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 ANXA2P3-201ENST00000404883 1008 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 PPIAP25-201ENST00000420177 540 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 RPL4P4-201ENST00000422486 1284 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC026254.1-201ENST00000479473 431 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 OR4A19P-201ENST00000533579 1103 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 ANAPC15-213ENST00000543050 807 ntTSL 3 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC009171.1-201ENST00000572673 266 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 TBX18-AS1-208ENST00000591225 762 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC113349.2-201ENST00000607804 377 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC244255.1-201ENST00000613463 398 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 HIST1H4D-201ENST00000614247 312 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 TPK1-214ENST00000639328 826 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AP000356.4-201ENST00000639500 172 ntBASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 RSPH4A-203ENST00000368581 2704 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC124804.1-202ENST00000583712 4315 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 GABRA1-203ENST00000428797 4285 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 NUCB2-201ENST00000323688 1905 ntAPPRIS ALT1 TSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AL358473.1-202ENST00000458003 3496 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 USP30-203ENST00000392784 2483 ntTSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 CCR4-201ENST00000330953 3095 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AL136968.2-201ENST00000407959 354 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC003075.1-208ENST00000415246 596 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 CCNT2-AS1-203ENST00000428857 677 ntTSL 4 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 RN7SL370P-201ENST00000470869 295 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC112719.1-201ENST00000477971 315 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC090142.2-201ENST00000483263 416 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 RPL7AP2-201ENST00000496515 740 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 RN7SL519P-201ENST00000497925 288 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC123768.2-201ENST00000500941 732 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 PSAT1P1-201ENST00000518968 1106 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC087627.1-201ENST00000522339 993 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 LINC01572-202ENST00000563770 568 ntTSL 5 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 SPINT1-AS1-204ENST00000568419 629 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AL807752.5-201ENST00000569497 820 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC021382.2-201ENST00000584547 922 ntTSL 3 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AL121917.2-201ENST00000605044 390 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 C1orf132-204ENST00000637970 1170 ntTSL 5 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 HLA-B-258ENST00000640615 240 ntBASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 SP140L-201ENST00000243810 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 XIST-211ENST00000635841 1734 ntTSL 5 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 RUBCNL-206ENST00000409879 2997 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 AL354984.1-201ENST00000371169 1854 ntTSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 TBCCD1-205ENST00000446782 2186 ntTSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 BTN2A3P-204ENST00000466808 2559 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 ZNF557-202ENST00000414706 5736 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SYCE2Q6PIF2 LRRC37A4P-202ENST00000581296 5372 ntBASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 EGF-206ENST00000509793 4489 ntTSL 2 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 ABL2-206ENST00000504405 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 MAGEE2-201ENST00000373359 2249 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SYCE2Q6PIF2 SLC9B1P3-201ENST00000452667 1334 ntBASIC9.09□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms