Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 RANP5-201ENST00000427731 655 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 RN7SL508P-201ENST00000464472 303 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 HNRNPA1P20-201ENST00000484852 955 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 OR7E129P-201ENST00000504655 968 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 TPRXL-211ENST00000532880 754 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 VDAC2P2-201ENST00000544463 901 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AC006557.4-201ENST00000585516 830 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 CD200R1L-205ENST00000617549 762 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AC010722.1-202ENST00000618284 573 ntTSL 4 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 EIF5P2-201ENST00000618904 1035 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AC119619.1-201ENST00000619728 112 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 AC007204.1-201ENST00000621794 555 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 KIAA1524-201ENST00000295746 4075 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 NMNAT1-201ENST00000377205 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 LINC00705-201ENST00000417883 1745 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 FBXW11P1-201ENST00000393804 1474 ntBASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 RPE-201ENST00000354506 3165 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 HIP1-204ENST00000434438 7066 ntTSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 SLC12A6-203ENST00000397702 4096 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 ADGRG1-203ENST00000540164 3820 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 SRP19-204ENST00000505459 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 CEP192-202ENST00000430049 3286 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SYCE2Q6PIF2 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 EEF1A1P13-201ENST00000503537 1389 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC092132.2-201ENST00000611227 2744 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC136428.3-201ENST00000566387 1990 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 HCAR1-201ENST00000432564 4768 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ADGRG1-202ENST00000456916 3860 ntTSL 2 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC008739.5-201ENST00000623035 1938 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 OR10T2-201ENST00000334438 945 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 PCNAP3-201ENST00000397222 778 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 CNN2P7-201ENST00000400583 932 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 VN1R13P-201ENST00000406212 885 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 RPSAP59-201ENST00000421048 890 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AL355863.1-201ENST00000424331 293 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 RPL12P19-201ENST00000429825 486 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 HMGN2P24-201ENST00000433516 273 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AL590609.1-201ENST00000442164 328 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AL135929.1-201ENST00000449287 552 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ATP5G1P6-201ENST00000451206 412 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC013275.1-202ENST00000457436 501 ntTSL 3 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AL031864.2-201ENST00000498507 350 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC022730.3-201ENST00000521051 736 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 SOD1P2-201ENST00000563903 451 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC136944.5-201ENST00000573021 151 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 JPT1-211ENST00000581874 517 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC087885.1-201ENST00000641910 848 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 POLR1B-203ENST00000409894 4457 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ZP2-204ENST00000574091 2241 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 EMC3-201ENST00000245046 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC021491.4-201ENST00000620769 2573 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 TCF4-240ENST00000568673 2398 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 BCO2-208ENST00000526088 1983 ntTSL 2 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 MYOM1-203ENST00000400569 4927 ntTSL 5 BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC022306.1-201ENST00000560489 1562 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 AC104619.3-201ENST00000509116 1387 ntBASIC9.12□□□□□ -0.95
SYCE2Q6PIF2 ZBTB14-201ENST00000357006 3528 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 SFR1-202ENST00000369729 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 KIF9-AS1-201ENST00000429315 4898 ntTSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 PDZK1-205ENST00000451928 1897 ntTSL 2 BASIC9.11□□□□□ -0.95
SYCE2Q6PIF2 AC020661.5-201ENST00000624853 1854 ntBASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms