Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF615-208ENST00000598071 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SLC1A1P43005 CELF1-215ENST00000532048 3044 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SLC1A1P43005 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
SLC1A1P43005 AC105342.1-201ENST00000378334 6848 ntBASIC9.04□□□□□ -0.96
SLC1A1P43005 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SLC1A1P43005 AC027369.1-202ENST00000534734 1330 ntBASIC9.04□□□□□ -0.96
SLC1A1P43005 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
SLC1A1P43005 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 CDH13-210ENST00000567445 1456 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 MIR146B-201ENST00000365699 73 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
SLC1A1P43005 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
SLC1A1P43005 TGFB2-AS1-201ENST00000414452 557 ntTSL 3 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC9.03□□□□□ -0.96
SLC1A1P43005 OR51A8P-201ENST00000421277 940 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 AL591686.1-201ENST00000421878 766 ntTSL 2 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AL606490.3-201ENST00000422410 270 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 CFL1P7-201ENST00000424759 486 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC9.03□□□□□ -0.96
SLC1A1P43005 LINC00475-206ENST00000434944 796 ntTSL 3 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AL135924.1-201ENST00000446146 423 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 AC073583.1-201ENST00000447553 400 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 PGA5-202ENST00000451616 971 ntTSL 2 BASIC9.03□□□□□ -0.96
SLC1A1P43005 HNRNPCP10-201ENST00000457130 884 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 RN7SL418P-201ENST00000473031 287 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 AC068531.1-201ENST00000502398 195 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 IGHVII-26-2-201ENST00000518751 325 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 AC137527.1-201ENST00000565839 1261 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AC005703.4-201ENST00000580422 538 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 G6PC-204ENST00000592383 987 ntTSL 2 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AC018695.4-201ENST00000602706 689 ntTSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 AL022345.3-201ENST00000611406 228 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 SNX18P5-201ENST00000619873 868 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 AC234791.1-201ENST00000620830 1203 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 OR51A8P-202ENST00000641606 1038 ntBASIC9.03□□□□□ -0.96
SLC1A1P43005 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
SLC1A1P43005 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 GSDMB-204ENST00000394179 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 ELMO2-202ENST00000352077 2157 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
SLC1A1P43005 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
SLC1A1P43005 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC9.03□□□□□ -0.96
SLC1A1P43005 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
SLC1A1P43005 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC9.02□□□□□ -0.96
SLC1A1P43005 ASB8-205ENST00000536549 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SLC1A1P43005 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SLC1A1P43005 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
SLC1A1P43005 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SLC1A1P43005 PRDM2-203ENST00000343137 5797 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
SLC1A1P43005 AC073349.2-201ENST00000427545 1603 ntBASIC9.02□□□□□ -0.96
SLC1A1P43005 PCLO-209ENST00000618073 1614 ntTSL 5 BASIC9.02□□□□□ -0.96
SLC1A1P43005 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 AC100771.2-201ENST00000525833 1350 ntTSL 3 BASIC9.02□□□□□ -0.97
SLC1A1P43005 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 PPFIA2-204ENST00000541017 4192 ntTSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SLC1A1P43005 LCN1P1-201ENST00000372031 505 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 TRBV27-201ENST00000390399 387 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
SLC1A1P43005 SNORA48.6-201ENST00000391156 130 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 RPL21P107-201ENST00000411449 460 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 AL450304.1-201ENST00000418657 759 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 AC119428.1-201ENST00000429099 383 ntTSL 3 BASIC9.02□□□□□ -0.97
SLC1A1P43005 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC9.02□□□□□ -0.97
SLC1A1P43005 AL139383.1-201ENST00000454681 892 ntTSL 5 BASIC9.02□□□□□ -0.97
SLC1A1P43005 ABCA9-AS1-201ENST00000458677 523 ntTSL 2 BASIC9.02□□□□□ -0.97
SLC1A1P43005 AL355312.3-201ENST00000472053 312 ntTSL 3 BASIC9.02□□□□□ -0.97
SLC1A1P43005 RPS28P7-201ENST00000473748 210 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
SLC1A1P43005 FTH1P4-201ENST00000480365 553 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 ACOT9-207ENST00000492081 683 ntTSL 3 BASIC9.02□□□□□ -0.97
SLC1A1P43005 RACK1-211ENST00000504726 388 ntTSL 5 BASIC9.02□□□□□ -0.97
SLC1A1P43005 LINC01341-205ENST00000509202 503 ntTSL 4 BASIC9.02□□□□□ -0.97
SLC1A1P43005 GUSBP3-201ENST00000509348 423 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 AC051619.5-203ENST00000561404 529 ntTSL 4 BASIC9.02□□□□□ -0.97
SLC1A1P43005 FRG2HP-201ENST00000568807 832 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 AL133351.4-201ENST00000604204 631 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 AC104794.4-201ENST00000607181 446 ntBASIC9.02□□□□□ -0.97
SLC1A1P43005 AC093726.2-201ENST00000609134 679 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms