Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 NEPRO-202ENST00000383675 4672 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 HCAR3-201ENST00000528880 2137 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 ADAM22-205ENST00000398209 9144 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 HAO2-202ENST00000361035 1668 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NFIA-212ENST00000485903 1674 ntTSL 5 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 SNORA14B-201ENST00000384452 135 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 KCNIP1-204ENST00000411494 684 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC244034.1-201ENST00000428027 792 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NR1I3-209ENST00000428574 1117 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NR1I3-211ENST00000442691 1114 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 PRKAG2-AS1-201ENST00000464464 382 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NR1I3-230ENST00000511944 620 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NR1I3-232ENST00000512372 861 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NR1I3-234ENST00000515621 1130 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NSMCE2-208ENST00000520866 1183 ntTSL 2 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AP002957.1-201ENST00000525952 406 ntTSL 3 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 CCDC58P5-201ENST00000536923 432 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC024270.1-201ENST00000559181 404 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 EDRF1-AS1-202ENST00000593871 592 ntTSL 5 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC123912.1-201ENST00000594564 447 ntTSL 3 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AP004247.4-201ENST00000608484 942 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC104237.3-201ENST00000611809 427 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC245505.3-201ENST00000616788 358 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 SEM1-223ENST00000623498 582 ntTSL 5 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AL356095.2-201ENST00000624025 457 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC073488.5-201ENST00000631993 754 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 LINC00032-201ENST00000638495 1040 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC108215.1-201ENST00000624463 3226 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 ZNF587P1-201ENST00000415378 1386 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 TBC1D8B-201ENST00000276175 3538 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 LARS2-201ENST00000265537 4281 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AC026877.1-201ENST00000476047 1411 ntBASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 AL008729.1-203ENST00000606150 2305 ntTSL 2 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 PSG8-204ENST00000406636 1610 ntTSL 2 BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
SYCE2Q6PIF2 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 NEUROD6-201ENST00000297142 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 NNT-208ENST00000512996 4288 ntTSL 5 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 RPL7L1P12-201ENST00000417594 729 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AKR1B1P8-201ENST00000418396 936 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC111200.2-201ENST00000418877 505 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC108448.2-201ENST00000431546 730 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 LINC01888-202ENST00000457602 574 ntTSL 2 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 RN7SL587P-201ENST00000459853 281 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 ZBTB20-AS5-201ENST00000465249 622 ntTSL 3 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC022973.1-201ENST00000490340 575 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 IGKV2D-14-201ENST00000522473 355 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AP002360.1-204ENST00000529331 700 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC069208.1-206ENST00000538905 832 ntTSL 4 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC156455.1-202ENST00000540968 587 ntTSL 4 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 MPPE1P1-201ENST00000557286 1076 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC074051.4-201ENST00000564888 892 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 ZNF83-210ENST00000597161 509 ntTSL 4 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC012511.1-201ENST00000608140 449 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AC073107.2-201ENST00000620476 238 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AL669830.1-201ENST00000621457 656 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 RFPL3S-206ENST00000621921 433 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 AL121594.6-201ENST00000633440 261 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 NCEH1-205ENST00000538775 4315 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 MDH1-201ENST00000233114 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 HSPD1P6-201ENST00000388967 1683 ntBASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 LCOR-209ENST00000540664 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SYCE2Q6PIF2 ANO4-207ENST00000550015 2293 ntTSL 2 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms