Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 Z97987.1-201ENST00000618051 433 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 SEM1-224ENST00000623693 729 ntTSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 R3HDM2-207ENST00000441731 4076 ntTSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 PLSCR4-210ENST00000493382 1375 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 ASNSP1-202ENST00000641079 1352 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 LINC01519-201ENST00000454178 2029 ntTSL 5 BASIC9.07□□□□□ -0.96
SLC1A1P43005 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC9.07□□□□□ -0.96
SLC1A1P43005 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC9.07□□□□□ -0.96
SLC1A1P43005 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 XAF1-202ENST00000361842 3623 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 SH3D19-204ENST00000427414 2656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC9.07□□□□□ -0.96
SLC1A1P43005 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 TTTY8B-201ENST00000328819 531 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 TTTY8-201ENST00000329684 531 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 LRMDA-201ENST00000372499 899 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
SLC1A1P43005 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 RN7SKP112-201ENST00000411213 318 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC9.07□□□□□ -0.96
SLC1A1P43005 RPL12P21-201ENST00000472214 518 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 PTPN20-215ENST00000505814 1244 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 LINC01095-203ENST00000512063 1175 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 ATOX1-206ENST00000522710 591 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
SLC1A1P43005 SETP16-201ENST00000531054 711 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC018448.2-201ENST00000548295 305 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC113146.1-201ENST00000558255 696 ntTSL 3 BASIC9.07□□□□□ -0.96
SLC1A1P43005 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC9.07□□□□□ -0.96
SLC1A1P43005 HMGN2P46-207ENST00000568669 388 ntTSL 3 BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC107990.1-201ENST00000590415 489 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC010359.1-201ENST00000602982 507 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 MIR6749-201ENST00000617008 69 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 AC119619.1-201ENST00000619728 112 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 Metazoa_SRP.175-201ENST00000619837 250 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 NF1P9-202ENST00000629550 966 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 SLC8A1-209ENST00000408028 2898 ntTSL 5 BASIC9.07□□□□□ -0.96
SLC1A1P43005 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC9.07□□□□□ -0.96
SLC1A1P43005 CEP68-205ENST00000537589 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
SLC1A1P43005 AC012467.2-201ENST00000607783 2583 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 ADAM20P3-201ENST00000508710 2106 ntBASIC9.07□□□□□ -0.96
SLC1A1P43005 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
SLC1A1P43005 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC9.06□□□□□ -0.96
SLC1A1P43005 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
SLC1A1P43005 FCGR3B-209ENST00000614870 1993 ntTSL 5 BASIC9.06□□□□□ -0.96
SLC1A1P43005 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 OR51E1-202ENST00000530215 2942 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 ZNF781-201ENST00000358582 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 ZNF483-202ENST00000355824 1239 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 Metazoa_SRP.3-201ENST00000366116 282 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 CST9LP1-201ENST00000376987 444 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 U3.17-201ENST00000390863 203 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC007359.1-201ENST00000417910 745 ntTSL 3 BASIC9.06□□□□□ -0.96
SLC1A1P43005 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC9.06□□□□□ -0.96
SLC1A1P43005 AC152007.1-201ENST00000428521 224 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC008175.1-202ENST00000439653 745 ntTSL 3 BASIC9.06□□□□□ -0.96
SLC1A1P43005 AC007237.1-201ENST00000442074 499 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC093655.1-201ENST00000446187 641 ntTSL 5 BASIC9.06□□□□□ -0.96
SLC1A1P43005 ZNF90P3-201ENST00000450345 1192 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 RBBP4P2-201ENST00000478252 1264 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC9.06□□□□□ -0.96
SLC1A1P43005 GPN1-209ENST00000503738 984 ntTSL 5 BASIC9.06□□□□□ -0.96
SLC1A1P43005 HGNC:18790-205ENST00000504171 980 ntTSL 2 BASIC9.06□□□□□ -0.96
SLC1A1P43005 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC9.06□□□□□ -0.96
SLC1A1P43005 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC9.06□□□□□ -0.96
SLC1A1P43005 NPM1P50-201ENST00000532878 867 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC138466.2-201ENST00000540993 304 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 NBPF5P-202ENST00000545941 1032 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC118658.1-201ENST00000560221 334 ntTSL 5 BASIC9.06□□□□□ -0.96
SLC1A1P43005 VN1R65P-201ENST00000566443 808 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AA06-201ENST00000579745 632 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
SLC1A1P43005 RN7SL474P-201ENST00000583485 301 ntBASIC9.06□□□□□ -0.96
SLC1A1P43005 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC9.06□□□□□ -0.96
SLC1A1P43005 FAM95B1-210ENST00000591605 743 ntTSL 5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms