Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL356234.2-201ENST00000637996 1160 ntTSL 5 BASIC9.1□□□□□ -0.95
SLC1A1P43005 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SLC1A1P43005 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
SLC1A1P43005 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC9.1□□□□□ -0.95
SLC1A1P43005 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
SLC1A1P43005 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SLC1A1P43005 R3HDM2P1-201ENST00000505381 1960 ntBASIC9.1□□□□□ -0.95
SLC1A1P43005 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC9.09□□□□□ -0.95
SLC1A1P43005 DRAIC-201ENST00000498938 1345 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 WARS-204ENST00000392882 2938 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC9.09□□□□□ -0.95
SLC1A1P43005 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC9.09□□□□□ -0.95
SLC1A1P43005 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 HSPD1P5-201ENST00000511127 1720 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 CSF2RA-202ENST00000355805 1410 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SLC1A1P43005 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 RETNLB-201ENST00000295755 676 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 OR1J2-201ENST00000335302 942 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SLC1A1P43005 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 RNA5SP141-201ENST00000364543 120 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 FABP5P10-201ENST00000435729 408 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 AC130689.1-201ENST00000451056 408 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 POLR2CP1-201ENST00000453699 765 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 GAPDHP35-201ENST00000513369 976 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 AC116345.1-202ENST00000513379 941 ntTSL 5 BASIC9.09□□□□□ -0.95
SLC1A1P43005 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 AC113143.1-201ENST00000534670 301 ntTSL 2 BASIC9.09□□□□□ -0.95
SLC1A1P43005 AC005381.1-204ENST00000585697 599 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 E2F3P1-201ENST00000589887 1230 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC9.09□□□□□ -0.95
SLC1A1P43005 uc_338.3-201ENST00000613268 181 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 MIR6831-201ENST00000617240 81 ntBASIC9.09□□□□□ -0.95
SLC1A1P43005 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SLC1A1P43005 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC9.09□□□□□ -0.95
SLC1A1P43005 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
SLC1A1P43005 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
SLC1A1P43005 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC9.09□□□□□ -0.95
SLC1A1P43005 TMEM19-204ENST00000549735 1772 ntTSL 2 BASIC9.09□□□□□ -0.95
SLC1A1P43005 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
SLC1A1P43005 TMEM213-203ENST00000442682 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.96
SLC1A1P43005 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 MBP-206ENST00000397863 4800 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 SELENOP-209ENST00000511224 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 AC118282.4-201ENST00000623090 1712 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 AL136140.2-201ENST00000624717 1705 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 GSPT1-206ENST00000563468 1962 ntAPPRIS ALT2 TSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 PTBP2-201ENST00000370197 3057 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 MIR185-201ENST00000385288 82 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 MRO-202ENST00000398439 951 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 LYG1-202ENST00000409448 1038 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 AC092810.3-201ENST00000416349 473 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 GCNT1P1-201ENST00000416567 1295 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 AL049734.1-201ENST00000422384 608 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 PSPC1P1-201ENST00000442352 665 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 CYP4F25P-201ENST00000446871 520 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 AF250324.1-204ENST00000501825 841 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 AC020688.1-201ENST00000519282 1248 ntBASIC9.08□□□□□ -0.96
SLC1A1P43005 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 SLAMF1-204ENST00000538290 1087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
SLC1A1P43005 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC9.08□□□□□ -0.96
SLC1A1P43005 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 WDR61-202ENST00000558311 1266 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
SLC1A1P43005 AC003965.1-201ENST00000575693 667 ntTSL 3 BASIC9.08□□□□□ -0.96
SLC1A1P43005 PDLIM1P3-201ENST00000582370 599 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms