Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CSNK1G3Q9Y6M4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 AL596275.1-201ENST00000423464 877 ntBASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 C1QBPP2-201ENST00000528754 825 ntBASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 AC069544.1-201ENST00000609399 999 ntBASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 FAM197Y4-202ENST00000622692 608 ntBASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CSNK1G3Q9Y6M4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 MIR718-201ENST00000390190 70 ntBASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 PKD1P6-201ENST00000343738 4769 ntBASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CSNK1G3Q9Y6M4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CSNK1G3Q9Y6M4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CSNK1G3Q9Y6M4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CSNK1G3Q9Y6M4 AL356652.1-201ENST00000615962 565 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms