Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.23■□□□□ 0.67
GPC6Q9Y625 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC6Q9Y625 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GPC6Q9Y625 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPC6Q9Y625 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPC6Q9Y625 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 AC026271.2-201ENST00000428091 497 ntBASIC19.22■□□□□ 0.67
GPC6Q9Y625 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
GPC6Q9Y625 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC6Q9Y625 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC6Q9Y625 AC027702.1-201ENST00000563810 1770 ntBASIC19.21■□□□□ 0.67
GPC6Q9Y625 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 AC011484.1-201ENST00000377652 1995 ntBASIC19.21■□□□□ 0.67
GPC6Q9Y625 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC6Q9Y625 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.21■□□□□ 0.66
GPC6Q9Y625 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC6Q9Y625 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC6Q9Y625 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 POU5F1P4-201ENST00000413175 1085 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC6Q9Y625 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L2-201ENST00000561772 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 AC087623.3-201ENST00000607047 1098 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L6-201ENST00000626483 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L1-201ENST00000627662 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L8-201ENST00000629013 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L3-201ENST00000630187 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L7-201ENST00000630678 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 DUX4L5-201ENST00000630834 1275 ntBASIC19.2■□□□□ 0.66
GPC6Q9Y625 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC6Q9Y625 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC6Q9Y625 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC6Q9Y625 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC6Q9Y625 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GPC6Q9Y625 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 AC008175.2-201ENST00000612840 297 ntBASIC19.19■□□□□ 0.66
GPC6Q9Y625 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC6Q9Y625 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms