Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA9Q9Y5G4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA9Q9Y5G4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA9Q9Y5G4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA9Q9Y5G4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHGA9Q9Y5G4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PCDHGA9Q9Y5G4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 MIR4497-201ENST00000583208 89 ntBASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.06■□□□□ 0.64
PCDHGA9Q9Y5G4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 AC005229.4-201ENST00000610085 2198 ntBASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCDHGA9Q9Y5G4 AC073130.3-201ENST00000624389 2278 ntBASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCDHGA9Q9Y5G4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms