Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 RBM17P2-201ENST00000616397 1405 ntBASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHGB6Q9Y5F9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 AL591742.1-201ENST00000604433 565 ntBASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDHGB6Q9Y5F9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 MKRN4P-201ENST00000444706 1521 ntBASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 LINC01006-201ENST00000333319 2292 ntBASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 Z98882.1-201ENST00000622160 2253 ntBASIC19.2■□□□□ 0.66
PCDHGB6Q9Y5F9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 AF106564.1-201ENST00000607058 2553 ntBASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCDHGB6Q9Y5F9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB6Q9Y5F9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB6Q9Y5F9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB6Q9Y5F9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB6Q9Y5F9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB6Q9Y5F9 MIPEPP3-201ENST00000412105 444 ntBASIC19.18■□□□□ 0.66
PCDHGB6Q9Y5F9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms