Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 RARRES2P4-201ENST00000514074 484 ntBASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 AC116050.2-201ENST00000612102 1779 ntBASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDHB11Q9Y5F2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 PRORSD1P-201ENST00000295112 541 ntBASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDHB11Q9Y5F2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
PCDHB11Q9Y5F2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 ESRRAP1-201ENST00000400596 1257 ntBASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 AC007322.3-201ENST00000426526 701 ntBASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDHB11Q9Y5F2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 DUSP5P2-201ENST00000426873 1033 ntBASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDHB11Q9Y5F2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 AC011484.1-201ENST00000377652 1995 ntBASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 AC121338.2-201ENST00000622535 1744 ntBASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDHB11Q9Y5F2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms