Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CTDP1Q9Y5B0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 FBXW4P1-201ENST00000426721 2239 ntBASIC23.59■■□□□ 1.37
CTDP1Q9Y5B0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 C1QBPP2-201ENST00000528754 825 ntBASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CTDP1Q9Y5B0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
CTDP1Q9Y5B0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
CTDP1Q9Y5B0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CTDP1Q9Y5B0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.36
CTDP1Q9Y5B0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.57■■□□□ 1.36
CTDP1Q9Y5B0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 AL390719.1-204ENST00000412397 1219 ntBASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 UBE2SP1-201ENST00000450587 669 ntBASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 AL359736.2-201ENST00000621992 437 ntBASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.56■■□□□ 1.36
CTDP1Q9Y5B0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 RPS2P4-201ENST00000476944 856 ntBASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.55■■□□□ 1.36
CTDP1Q9Y5B0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms