Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RCL1Q9Y2P8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RCL1Q9Y2P8 TNXA-203ENST00000507684 2038 ntBASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RCL1Q9Y2P8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 SMUG1P1-201ENST00000590640 811 ntBASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 AC092171.4-201ENST00000609130 632 ntBASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RCL1Q9Y2P8 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RCL1Q9Y2P8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms