Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRCH1Q9Y2L9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 KRT16P3-201ENST00000439127 1283 ntBASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 UNC93B8-201ENST00000511903 705 ntBASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 AC131212.1-201ENST00000613771 668 ntBASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 FP700111.2-201ENST00000619190 1892 ntBASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LRCH1Q9Y2L9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 TSPY9P-201ENST00000440215 945 ntBASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 TSPY11P-201ENST00000442607 1045 ntBASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.35■□□□□ 0.69
LRCH1Q9Y2L9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
LRCH1Q9Y2L9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH1Q9Y2L9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH1Q9Y2L9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LRCH1Q9Y2L9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH1Q9Y2L9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH1Q9Y2L9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH1Q9Y2L9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH1Q9Y2L9 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms