Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC3AQ9Y2H6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
FNDC3AQ9Y2H6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC3AQ9Y2H6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
FNDC3AQ9Y2H6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.8■□□□□ 0.92
FNDC3AQ9Y2H6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 ESRRAP1-201ENST00000400596 1257 ntBASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 AC245052.3-201ENST00000450182 901 ntBASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
FNDC3AQ9Y2H6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
FNDC3AQ9Y2H6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 AC097658.1-201ENST00000475555 843 ntBASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
FNDC3AQ9Y2H6 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
FNDC3AQ9Y2H6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
FNDC3AQ9Y2H6 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 GCSHP5-201ENST00000443090 522 ntBASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
FNDC3AQ9Y2H6 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
FNDC3AQ9Y2H6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms