Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.74■□□□□ 0.91
CHMP2BQ9UQN3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 AC027612.3-201ENST00000413684 1047 ntBASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 AC104187.1-201ENST00000607510 612 ntBASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 AC007952.6-201ENST00000573168 2673 ntBASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 AC003957.1-201ENST00000625108 2673 ntBASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.73■□□□□ 0.91
CHMP2BQ9UQN3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 SLC7A5P2-201ENST00000553010 536 ntBASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CHMP2BQ9UQN3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CHMP2BQ9UQN3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CHMP2BQ9UQN3 AC116050.2-201ENST00000612102 1779 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L2-201ENST00000561772 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 AC005837.3-201ENST00000612163 286 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L6-201ENST00000626483 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L1-201ENST00000627662 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L8-201ENST00000629013 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L3-201ENST00000630187 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L7-201ENST00000630678 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DUX4L5-201ENST00000630834 1275 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 MIR2861-201ENST00000636310 90 ntBASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CHMP2BQ9UQN3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 SMG8-203ENST00000578922 2178 ntBASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 LINC02228-203ENST00000641970 1355 ntBASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHMP2BQ9UQN3 TCF3P1-201ENST00000423021 1937 ntBASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP2BQ9UQN3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms