Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHRNA9Q9UGM1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 CNN2P6-201ENST00000439038 900 ntBASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 AL162412.1-201ENST00000567129 965 ntBASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 AC231657.2-201ENST00000624556 255 ntBASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHRNA9Q9UGM1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 AC004911.1-201ENST00000416316 871 ntBASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.6■□□□□ 0.57
CHRNA9Q9UGM1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 AC020907.5-201ENST00000624372 1936 ntBASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA9Q9UGM1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA9Q9UGM1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.58■□□□□ 0.57
CHRNA9Q9UGM1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA9Q9UGM1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms