Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.45■□□□□ 0.7
NIPSNAP3AQ9UFN0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC008175.2-201ENST00000612840 297 ntBASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC008406.3-201ENST00000620001 1374 ntBASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NIPSNAP3AQ9UFN0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 EDA-201ENST00000338901 1233 ntBASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.43■□□□□ 0.7
NIPSNAP3AQ9UFN0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 POU5F1P4-201ENST00000413175 1085 ntBASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 AF213884.3-201ENST00000563833 479 ntBASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC106739.1-201ENST00000617035 715 ntBASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 RASA4CP-201ENST00000424092 1398 ntBASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NIPSNAP3AQ9UFN0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NIPSNAP3AQ9UFN0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms