Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 NCF1B-203ENST00000435988 1254 ntBASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 AC100791.3-201ENST00000617619 330 ntBASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PPARGC1AQ9UBK2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PPARGC1AQ9UBK2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 AL121832.2-201ENST00000610979 668 ntBASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PPARGC1AQ9UBK2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 AF201337.1-201ENST00000520239 748 ntBASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PPARGC1AQ9UBK2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PPARGC1AQ9UBK2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 PLK5-205ENST00000642079 1969 ntBASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 AL121603.2-201ENST00000557373 2117 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms