Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.94■□□□□ 0.46
COMMD3Q9UBI1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COMMD3Q9UBI1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 AC092720.2-201ENST00000602388 1665 ntBASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COMMD3Q9UBI1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.91■□□□□ 0.46
COMMD3Q9UBI1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
COMMD3Q9UBI1 HCG11-201ENST00000411553 5696 ntBASIC17.89■□□□□ 0.46
COMMD3Q9UBI1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
COMMD3Q9UBI1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COMMD3Q9UBI1 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COMMD3Q9UBI1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
COMMD3Q9UBI1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
COMMD3Q9UBI1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 AC026471.1-201ENST00000564629 3026 ntBASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 AC010525.1-201ENST00000585559 441 ntBASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
COMMD3Q9UBI1 AC010997.5-201ENST00000609182 354 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms