Protein–RNA interactions for Protein: Q9UBE0

SAE1, SUMO-activating enzyme subunit 1, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAE1Q9UBE0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 MIR2861-201ENST00000636310 90 ntBASIC21.12■□□□□ 0.97
SAE1Q9UBE0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.12■□□□□ 0.97
SAE1Q9UBE0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.11■□□□□ 0.97
SAE1Q9UBE0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 AC092720.2-201ENST00000602388 1665 ntBASIC21.1■□□□□ 0.97
SAE1Q9UBE0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 KRT18P5-201ENST00000436075 1291 ntBASIC21.1■□□□□ 0.97
SAE1Q9UBE0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SAE1Q9UBE0 AC099778.1-201ENST00000568593 1911 ntBASIC21.1■□□□□ 0.97
SAE1Q9UBE0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.09■□□□□ 0.97
SAE1Q9UBE0 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
SAE1Q9UBE0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 AC007322.3-201ENST00000426526 701 ntBASIC21.08■□□□□ 0.97
SAE1Q9UBE0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SAE1Q9UBE0 SMG8-203ENST00000578922 2178 ntBASIC21.08■□□□□ 0.97
SAE1Q9UBE0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SAE1Q9UBE0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SAE1Q9UBE0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SAE1Q9UBE0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms