Protein–RNA interactions for Protein: Q9P2B4

CTTNBP2NL, CTTNBP2 N-terminal-like protein, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NLQ9P2B4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 KRT18P20-201ENST00000548986 1279 ntBASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CTTNBP2NLQ9P2B4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTTNBP2NLQ9P2B4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.64■■□□□ 1.06
CTTNBP2NLQ9P2B4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTTNBP2NLQ9P2B4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CTTNBP2NLQ9P2B4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CTTNBP2NLQ9P2B4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.64■■□□□ 1.06
CTTNBP2NLQ9P2B4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 ZNRF2P3-201ENST00000424200 374 ntBASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CTTNBP2NLQ9P2B4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 MIR2861-201ENST00000636310 90 ntBASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 AC099778.1-201ENST00000568593 1911 ntBASIC21.63■■□□□ 1.05
CTTNBP2NLQ9P2B4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CTTNBP2NLQ9P2B4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CTTNBP2NLQ9P2B4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms