Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC239859.2-201ENST00000444165 318 ntBASIC19.71■□□□□ 0.75
NDE1Q9NXR1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NDE1Q9NXR1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 BX005040.4-201ENST00000637145 1518 ntBASIC19.7■□□□□ 0.74
NDE1Q9NXR1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.7■□□□□ 0.74
NDE1Q9NXR1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.69■□□□□ 0.74
NDE1Q9NXR1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NDE1Q9NXR1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NDE1Q9NXR1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 LETM1P2-201ENST00000597330 2178 ntBASIC19.67■□□□□ 0.74
NDE1Q9NXR1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 AL138724.1-201ENST00000606771 1088 ntBASIC19.67■□□□□ 0.74
NDE1Q9NXR1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NDE1Q9NXR1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NDE1Q9NXR1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms