Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
SLC52A1Q9NWF4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 AP003071.4-201ENST00000562276 1284 ntBASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 AF186192.3-201ENST00000583427 947 ntBASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 Six3os1_6.1-201ENST00000620790 196 ntBASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SLC52A1Q9NWF4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC29.49■■■□□ 2.31
SLC52A1Q9NWF4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 KRT16P5-201ENST00000455284 522 ntBASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 CD177P1-201ENST00000606252 935 ntBASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SLC52A1Q9NWF4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 AC023632.3-201ENST00000521633 145 ntBASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC29.47■■■□□ 2.31
SLC52A1Q9NWF4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SLC52A1Q9NWF4 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.31
SLC52A1Q9NWF4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC29.45■■■□□ 2.3
SLC52A1Q9NWF4 C9orf163-202ENST00000624034 2573 ntBASIC29.45■■■□□ 2.3
SLC52A1Q9NWF4 HTR7P1-201ENST00000538670 1336 ntBASIC29.45■■■□□ 2.3
SLC52A1Q9NWF4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 AL353807.1-201ENST00000427475 662 ntBASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SLC52A1Q9NWF4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 MMP23A-201ENST00000234610 1017 ntBASIC29.43■■■□□ 2.3
SLC52A1Q9NWF4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms