Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 GPX1P1-201ENST00000388829 606 ntBASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
ECHDC1Q9NTX5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 TSPY6P-201ENST00000448518 926 ntBASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
ECHDC1Q9NTX5 AC073314.1-201ENST00000568729 2216 ntBASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 KRT17P1-201ENST00000399211 1546 ntBASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 PKD1P6-201ENST00000343738 4769 ntBASIC24.9■■□□□ 1.58
ECHDC1Q9NTX5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 AC105020.6-201ENST00000621523 1217 ntBASIC24.89■■□□□ 1.58
ECHDC1Q9NTX5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.89■■□□□ 1.57
ECHDC1Q9NTX5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 AL157384.1-201ENST00000445995 2473 ntBASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 AP005212.1-201ENST00000581547 1997 ntBASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
ECHDC1Q9NTX5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
ECHDC1Q9NTX5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ECHDC1Q9NTX5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.86■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms