Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 RN7SL471P-201ENST00000580476 299 ntBASIC21.15■□□□□ 0.98
HPS4Q9NQG7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPS4Q9NQG7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HPS4Q9NQG7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.14■□□□□ 0.98
HPS4Q9NQG7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS4Q9NQG7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS4Q9NQG7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 AC069544.1-201ENST00000609399 999 ntBASIC21.14■□□□□ 0.97
HPS4Q9NQG7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.14■□□□□ 0.97
HPS4Q9NQG7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 AL024507.2-201ENST00000606070 2574 ntBASIC21.13■□□□□ 0.97
HPS4Q9NQG7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.13■□□□□ 0.97
HPS4Q9NQG7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 C2orf69P4-201ENST00000565394 541 ntBASIC21.12■□□□□ 0.97
HPS4Q9NQG7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 FAM197Y4-202ENST00000622692 608 ntBASIC21.12■□□□□ 0.97
HPS4Q9NQG7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPS4Q9NQG7 AC087633.2-202ENST00000565166 1439 ntBASIC21.12■□□□□ 0.97
HPS4Q9NQG7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPS4Q9NQG7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.1■□□□□ 0.97
HPS4Q9NQG7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.1■□□□□ 0.97
HPS4Q9NQG7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms