Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 C1QBPP2-201ENST00000528754 825 ntBASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
SCAF1Q9H7N4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 LINC01006-201ENST00000333319 2292 ntBASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
SCAF1Q9H7N4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 AC133561.5-201ENST00000635547 218 ntBASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SCAF1Q9H7N4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 AL512625.2-201ENST00000417533 625 ntBASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 RPPH1-201ENST00000516869 333 ntBASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
SCAF1Q9H7N4 ARMC10P1-201ENST00000313754 855 ntBASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
SCAF1Q9H7N4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 KRT18P35-201ENST00000510488 1269 ntBASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC30.22■■■□□ 2.43
SCAF1Q9H7N4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SCAF1Q9H7N4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms