Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ABHD17AP4-201ENST00000411545 909 ntBASIC19.43■□□□□ 0.7
VCX3BQ9H321 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
VCX3BQ9H321 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCX3BQ9H321 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCX3BQ9H321 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VCX3BQ9H321 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 AC139795.1-202ENST00000500444 432 ntBASIC19.41■□□□□ 0.7
VCX3BQ9H321 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 AC068587.7-201ENST00000641602 218 ntBASIC19.41■□□□□ 0.7
VCX3BQ9H321 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.41■□□□□ 0.7
VCX3BQ9H321 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCX3BQ9H321 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 AC020916.1-201ENST00000587762 1774 ntBASIC19.4■□□□□ 0.7
VCX3BQ9H321 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 MIR6722-201ENST00000617286 78 ntBASIC19.4■□□□□ 0.7
VCX3BQ9H321 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 LTB4R2-202ENST00000528054 3092 ntBASIC19.4■□□□□ 0.7
VCX3BQ9H321 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCX3BQ9H321 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
VCX3BQ9H321 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCX3BQ9H321 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCX3BQ9H321 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.39■□□□□ 0.7
VCX3BQ9H321 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.39■□□□□ 0.7
VCX3BQ9H321 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
VCX3BQ9H321 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.39■□□□□ 0.7
VCX3BQ9H321 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 MIR639-201ENST00000384974 98 ntBASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms