Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 RBM17P2-201ENST00000616397 1405 ntBASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 MYCNOS-205ENST00000641950 531 ntBASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC68Q9H2F9 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC68Q9H2F9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 KRT18P61-201ENST00000585825 1298 ntBASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC68Q9H2F9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CCDC68Q9H2F9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 AC007322.3-201ENST00000426526 701 ntBASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 KRT18P11-201ENST00000435214 1283 ntBASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC68Q9H2F9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC027702.1-201ENST00000563810 1770 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC091799.1-201ENST00000422823 811 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 CDV3P1-201ENST00000471403 739 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC137761.2-201ENST00000561729 223 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 RARRES2P6-201ENST00000567333 442 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC145350.3-201ENST00000569033 163 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 AC073314.1-201ENST00000568729 2216 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 GABARAPL3-202ENST00000624044 1851 ntBASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC68Q9H2F9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms