Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 DUX4L7-201ENST00000630678 1275 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4L5-201ENST00000630834 1275 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 MIR2861-201ENST00000636310 90 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS16Q9H269 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS16Q9H269 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS16Q9H269 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS16Q9H269 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS16Q9H269 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.18
VPS16Q9H269 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
VPS16Q9H269 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.39■■□□□ 1.18
VPS16Q9H269 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
VPS16Q9H269 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
VPS16Q9H269 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS16Q9H269 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.39■■□□□ 1.17
VPS16Q9H269 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.39■■□□□ 1.17
VPS16Q9H269 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
VPS16Q9H269 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS16Q9H269 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
VPS16Q9H269 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.39■■□□□ 1.17
VPS16Q9H269 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.39■■□□□ 1.17
VPS16Q9H269 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
VPS16Q9H269 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.38■■□□□ 1.17
VPS16Q9H269 SMG8-203ENST00000578922 2178 ntBASIC22.38■■□□□ 1.17
VPS16Q9H269 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS16Q9H269 MIR638-201ENST00000385237 100 ntBASIC22.38■■□□□ 1.17
VPS16Q9H269 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
VPS16Q9H269 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS16Q9H269 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.38■■□□□ 1.17
VPS16Q9H269 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
VPS16Q9H269 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS16Q9H269 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS16Q9H269 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22.38■■□□□ 1.17
VPS16Q9H269 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS16Q9H269 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
VPS16Q9H269 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
VPS16Q9H269 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
VPS16Q9H269 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.37■■□□□ 1.17
VPS16Q9H269 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS16Q9H269 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.37■■□□□ 1.17
VPS16Q9H269 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.37■■□□□ 1.17
VPS16Q9H269 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
VPS16Q9H269 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
VPS16Q9H269 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.37■■□□□ 1.17
VPS16Q9H269 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
VPS16Q9H269 AC007952.6-201ENST00000573168 2673 ntBASIC22.36■■□□□ 1.17
VPS16Q9H269 AC003957.1-201ENST00000625108 2673 ntBASIC22.36■■□□□ 1.17
VPS16Q9H269 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
VPS16Q9H269 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
VPS16Q9H269 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.36■■□□□ 1.17
VPS16Q9H269 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
VPS16Q9H269 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
VPS16Q9H269 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS16Q9H269 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS16Q9H269 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS16Q9H269 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
VPS16Q9H269 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.35■■□□□ 1.17
VPS16Q9H269 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS16Q9H269 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
VPS16Q9H269 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
VPS16Q9H269 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
VPS16Q9H269 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
VPS16Q9H269 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS16Q9H269 TCF3P1-201ENST00000423021 1937 ntBASIC22.34■■□□□ 1.17
VPS16Q9H269 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
VPS16Q9H269 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.34■■□□□ 1.17
VPS16Q9H269 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
VPS16Q9H269 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.34■■□□□ 1.17
VPS16Q9H269 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.34■■□□□ 1.17
VPS16Q9H269 TERF1P2-201ENST00000583350 1212 ntBASIC22.34■■□□□ 1.17
VPS16Q9H269 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
VPS16Q9H269 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.34■■□□□ 1.17
VPS16Q9H269 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS16Q9H269 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC22.34■■□□□ 1.17
VPS16Q9H269 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
VPS16Q9H269 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
VPS16Q9H269 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms