Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 AP006294.2-201ENST00000641667 209 ntBASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.3■□□□□ 0.36
RAB1BQ9H0U4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 UNC93B4-201ENST00000505679 747 ntBASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB1BQ9H0U4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB1BQ9H0U4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 AC142381.4-202ENST00000563973 229 ntBASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 AC073648.6-201ENST00000641589 218 ntBASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB1BQ9H0U4 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB1BQ9H0U4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.27■□□□□ 0.35
RAB1BQ9H0U4 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB1BQ9H0U4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 EP400NL-214ENST00000641289 2402 ntBASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 SOX15-203ENST00000570788 1093 ntBASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RAB1BQ9H0U4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms